Search results for " dataset"

showing 10 items of 37 documents

Integrated analysis of colorectal cancer microRNA datasets: Identification of microRNAs associated with tumor development

2018

Colorectal cancer (CRC) is one of the leading cause of cancer death worldwide. Currently, no effective early diagnostic biomarkers are available for colorectal carcinoma. Therefore, there is a need to discover new molecules able to identify pre-cancerous lesions. Recently, microRNAs (miRNAs) have been associated with the onset of specific pathologies, thus the identification of miRNAs associated to colorectal cancer may be used to detect this pathology at early stages. On these bases, the expression levels of miRNAs were analyzed to compare the miRNAs expression levels of colorectal cancer samples and normal tissues in several miRNA datasets. This analysis revealed a group of 19 differentia…

0301 basic medicineMAPK/ERK pathwayAgingColorectal cancerDatasets as TopicBiology03 medical and health sciences0302 clinical medicineMismatch Repair PathwaymicroRNAmedicineHumansSettore MED/05 - Patologia ClinicaGenePI3K/AKT/mTOR pathwayBioinformaticWnt signaling pathwayMicroRNAbioinformaticsBiomarkerCell Biologymedicine.diseaseColorectal cancerBiomarker (cell)MicroRNAs030104 developmental biology030220 oncology & carcinogenesisBioinformatics; Biomarker; Colorectal cancer; Dataset; MicroRNA; Aging; Cell BiologyCancer researchColorectal NeoplasmsTranscriptomeResearch PaperDataset
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Compendium of TCDD-mediated transcriptomic response datasets in mammalian model systems.

2017

Background 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) is the most potent congener of the dioxin class of environmental contaminants. Exposure to TCDD causes a wide range of toxic outcomes, ranging from chloracne to acute lethality. The severity of toxicity is highly dependent on the aryl hydrocarbon receptor (AHR). Binding of TCDD to the AHR leads to changes in transcription of numerous genes. Studies evaluating the transcriptional changes brought on by TCDD may provide valuable insight into the role of the AHR in human health and disease. We therefore compiled a collection of transcriptomic datasets that can be used to aid the scientific community in better understanding the transcriptiona…

0301 basic medicineMaleTCDDPolychlorinated DibenzodioxinsBioinformaticsMicroarray datasetsAHRWhite adipose tissueBiologyWeb BrowserProteomics413 Veterinary scienceMedical and Health SciencesCell LineTranscriptome03 medical and health sciencesMice0302 clinical medicineTranscription (biology)Information and Computing SciencesmedicineGeneticsAnimalsHumansheterocyclic compoundsGeneGeneticsGene Expression ProfilingRComputational BiologyBiological SciencesAryl hydrocarbon receptormedicine.disease3. Good healthRatsChloracnestomatognathic diseases030104 developmental biologyGene Expression Regulation030220 oncology & carcinogenesisAgent Orange & Dioxinbiology.proteinEnvironmental PollutantsFemaleDNA microarrayTranscriptomeSoftwareBiotechnology
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Decoding Children's Social Behavior

2013

We introduce a new problem domain for activity recognition: the analysis of children's social and communicative behaviors based on video and audio data. We specifically target interactions between children aged 1-2 years and an adult. Such interactions arise naturally in the diagnosis and treatment of developmental disorders such as autism. We introduce a new publicly-available dataset containing over 160 sessions of a 3-5 minute child-adult interaction. In each session, the adult examiner followed a semi-structured play interaction protocol which was designed to elicit a broad range of social behaviors. We identify the key technical challenges in analyzing these behaviors, and describe met…

Behavior Psychology Dataset Video analysis Speech Analysis AutismInter-action protocolsSocial and communicative behaviorInteraction protocol02 engineering and technologycomputer.software_genreAnnan data- och informationsvetenskapSession (web analytics)Activity recognitionTechnical challenges0202 electrical engineering electronic engineering information engineeringmedicineSocial behaviorAudio signal processingMultimediabusiness.industryDevelopmental disorders020207 software engineeringmedicine.diseaseSemi-structuredResearch questionsActivity recognitionProblem domainKey (cryptography)Autism020201 artificial intelligence & image processingArtificial intelligencePsychologybusinessOther Computer and Information SciencecomputerCognitive psychologySocial behavior2013 IEEE Conference on Computer Vision and Pattern Recognition
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BRIMA : Low-Overhead Browser-Only Image Annotation Tool

2021

Image annotation and large annotated datasets are crucial parts within the Computer Vision and Artificial Intelligence fields. At the same time, it is well-known and acknowledged by the research community that the image annotation process is challenging, time-consuming and hard to scale. Therefore, the researchers and practitioners are always seeking ways to perform the annotations easier, faster, and at higher quality. Even though several widely used tools exist and the tools’ landscape evolved considerably, most of the tools still require intricate technical setups and high levels of technical savviness from its operators and crowdsource contributors.In order to address such challenges, w…

COCOhahmontunnistus (tietotekniikka)selaimetjoukkoistaminenimage dataset generationcrowdsource annotationannotointiannotation toolkonenäköimage annotationkuvat
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Look for methods, not conclusions

2019

Qualunque sia l'esito effettivo di un'indagine su un caso di presunta manipolazione dei dati, ci sono alcuni principi fermi che sono sempre veri e alcuni errori che devono essere evitati.

Cancer ResearchMolecular biologyPeer ReviewScienceImmunologyScientific MisconductSettore AGR/13 - Chimica Agrariamethods; verification experimental datasetresearch integrityDiseasesmethodsCellular and Molecular NeuroscienceCorrespondenceScientific methodHumansexperimental datasetlcsh:QH573-671Scientific misconductPeer Review Researchlcsh:CytologyResearchCell BiologyEngineering ethicsverificationPsychologyHumans; Peer Review Research; Science; Scientific Misconduct
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Analysis of HMAX Algorithm on Black Bar Image Dataset

2020

An accurate detection and classification of scenes and objects is essential for interacting with the world, both for living beings and for artificial systems. To reproduce this ability, which is so effective in the animal world, numerous computational models have been proposed, frequently based on bioinspired, computational structures. Among these, Hierarchical Max-pooling (HMAX) is probably one of the most important models. HMAX is a recognition model, mimicking the structures and functions of the primate visual cortex. HMAX has already proven its effectiveness and versatility. Nevertheless, its computational structure presents some criticalities, whose impact on the results has never been…

Computer Networks and CommunicationsComputer sciencelcsh:TK7800-8360Context (language use)02 engineering and technologySet (abstract data type)03 medical and health sciences0302 clinical medicineGabor filterBBIDEncoding (memory)0202 electrical engineering electronic engineering information engineeringElectrical and Electronic EngineeringModularity (networks)Contextual image classificationbusiness.industrylcsh:ElectronicsPattern recognitioncomputational modelBlack Bar Image DatasetHardware and ArchitectureControl and Systems EngineeringHMAXSignal Processingtexture classification020201 artificial intelligence & image processingArtificial intelligencerecognitionbusiness030217 neurology & neurosurgeryimage classificationElectronics
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A Wavelet approach to extract main features from indirect immunofluorescence images

2019

A number of previous studies have shown that IIF image analysis requires complex and sometimes heterogeneous and diversified methods. Robust solutions can be proposed but they need to orchestrate several methods from low-level analysis up to more complex neural networks or SVM for data classification. The contribution intends to highlight the versatility of Wavelet Transform (WT) and their use in various levels of analysis for the classification of IIF images in order to develop a system capable of performing: image enhancement, ROI segmentation and object classification. Therefore, WT was adopted in the de-noise section, segmentation and classification. This analysis allows frequencies cha…

Computer scienceData classificationWavelet Transform02 engineering and technologyPattern Recognition030218 nuclear medicine & medical imaging03 medical and health sciencesSegmentation0302 clinical medicineWaveletRobustness (computer science)IIF dataset0202 electrical engineering electronic engineering information engineeringSegmentationMedical diagnosisSettore INF/01 - InformaticaArtificial neural networkbusiness.industryDenoiseWavelet transformPattern recognitionClassificationSupport vector machine020201 artificial intelligence & image processingArtificial intelligencebusinessProceedings of the 20th International Conference on Computer Systems and Technologies
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Machine learning risk prediction of mortality for patients undergoing surgery with perioperative SARS-CoV-2: the COVIDSurg mortality score

2021

The British journal of surgery 108(11), 1274-1292 (2021). doi:10.1093/bjs/znab183

Cuidado perioperatorioAcademicSubjects/MED00910Settore MED/18 - CHIRURGIA GENERALEMedizinpulmonary complicationspreoperative screeningDatasets as TopicSurgical Procedures Operative/mortality030230 surgeryperioperative care ; surgical procedures ; operative mortality ; machine learning ; sars-cov-2Medical and Health SciencesProcediments quirúrgicsCohort StudiesMachine LearningTumours of the digestive tract Radboud Institute for Health Sciences [Radboudumc 14]0302 clinical medicineModelsProcedimientos quirúrgicosMedicine and Health SciencesCOVIDSurg Collaborative Co-authorsMedicine030212 general & internal medicineskin and connective tissue diseasesRapid Research Communication11 Medical and Health SciencesOperative/mortalitySARS-CoV-19COVID-19/mortalityStatisticalCOVID-19/mortality; Cohort Studies; Datasets as Topic; Humans; Machine Learning; Models Statistical; Risk Assessment; SARS-CoV-2; Surgical Procedures Operative/mortalityCOVID-19; Cohort Studies; Datasets as Topic; Humans; Machine Learning; SARS-CoV-2; Surgical Procedures Operative; Models Statistical; Risk AssessmentAprendizaje automáticoOperativeSurgical Procedures OperativeoutcomeOperativo[SDV.IB]Life Sciences [q-bio]/BioengineeringPatient SafetyAcademicSubjects/MED000106.4 SurgeryLife Sciences & BiomedicineHuman61medicine.medical_specialty616.9Coronavirus disease 2019 (COVID-19)Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-.Risk AssessmentNOCOVIDSurg CollaborativeVaccine Related03 medical and health sciencesClinical ResearchBiodefenseCures perioperatòriesAprenentatge automàticMortalitatHumansOperatiusLS7_4Surgical ProceduresScience & TechnologyModels Statisticalbusiness.industrySARS-CoV-2SARS-CoV-2 infectionKirurgiPreventionnot indicatedcovid 19fungiEvaluation of treatments and therapeutic interventionsCOVID-19Perioperativecovid 19; pulmonary complications; postoperative mortality risk; SARS-CoV-2 infection; preoperative screening; vaccinationvaccinationmortalityGood Health and Well BeingMortalidadEmergency medicineSurgeryHuman medicineCohort Studiebusinesspostoperative mortality riskPerioperative care
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Synchrotron Radiation-Based Micro-XANES and Micro-XRF Study of Unsuccessfully Produced Egyptian Blue from the Late Hellenistic Production Site of Kos…

2021

International audience; This paper examines the production technology of Egyptian blue, an ancient artificial pigment, through the investigation of an unsuccessfully produced pellet derived from the Hellenistic production site of Kos (Dodecanese, Greece). This heterogeneous material was investigated by a combination of laboratory and synchrotron radiation-based (SR) techniques: scanning electron microscopy coupled with energy-dispersive Xray spectrometry, micro-Raman spectroscopy, high-resolution SR micro-X-ray fluorescence spectroscopy, and SR micro-X-ray absorption near-edge structure spectroscopy (XANES), at the ID21 beamline of the European Synchrotron Radiation Facility. Principal comp…

CupriteAbsorption spectroscopyMineralogySynchrotron radiationLarge dataset01 natural sciencesFluorescence spectroscopyArticleAnalytical ChemistrySynchrotronEgyptian bluechemistry.chemical_compoundAbsorption spectroscopy0601 history and archaeology[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyCopper oxideSpectroscopyFluorescence spectroscopyX ray absorption060102 archaeologyGreeceChemistryX ray absorption near edge structure spectroscopyOxide mineralSilicates010401 analytical chemistry06 humanities and the artsXANES0104 chemical sciencesX-Ray Absorption SpectroscopyBeamlinevisual_artvisual_art.visual_art_mediumScanning electron microscopyCopperSynchrotrons
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An Heuristic Approach for the Training Dataset Selection in Fingerprint Classification Tasks

2015

Fingerprint classification is a key issue in automatic fingerprint identification systems. It aims to reduce the item search time within the fingerprint database without affecting the accuracy rate. In this paper an heuristic approach using only the directional image information for the training dataset selection in fingerprint classification tasks is described. The method combines a Fuzzy C-Means clustering method and a Naive Bayes Classifier and it is composed of three modules: the first module builds the working datasets, the second module extracts the training images dataset and, finally, the third module classifies fingerprint images in four classes. Unlike literature approaches using …

Directional imageFingerprint classificationComputer sciencebusiness.industryHeuristicNaive bayes classifierTraining dataset optimizationPattern recognitionBayes classifiercomputer.software_genreClass (biology)Fuzzy logicNaive Bayes classifierComputingMethodologies_PATTERNRECOGNITIONFingerprintArtificial intelligenceData miningCluster analysisbusinesscomputerSelection (genetic algorithm)Fuzzy C-Mean
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